STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0973Nucleic acid-binding protein. (399 aa)    
Predicted Functional Partners:
PcaF_1
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.861
RMCT_0975
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.706
Frc_10
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
       0.699
YrbE4B_2
ABC-type transport system.
  
    0.674
MlaE_12
ABC-type transport system.
  
    0.666
RMCT_3980
Putative uncharacterized protein.
  
 
 0.665
RMCT_0969
Virulence factor Mce family protein.
       0.656
RMCT_0968
Virulence factor Mce family protein.
       0.655
RMCT_1932
Lipid-transfer protein.
  
 
 0.627
RMCT_0339
acetyl-CoA acetyltransferase.
  
 
 0.614
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.