Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
FabG_16Dehydrogenase. (233 aa)    
Predicted Functional Partners:
RMCT_4707
Linear gramicidin synthetase subunit D.
 
 
 0.817
RMCT_0979
Cytochrome P450.
  
   0.757
RMCT_0977
Short-chain dehydrogenase.
 
    
0.743
KasA_2
Fatty acid synthase.
  
 0.707
SubB_2
Ferredoxin.
       0.706
LgrD_2
Linear gramicidin synthetase subunit D.
 
 
 0.611
RMCT_0975
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.609
KatA
Catalase.
  
 0.599
KatE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.599
Frc_10
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
   
 0.593
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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