Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
RMCT_0977Short-chain dehydrogenase. (286 aa)    
Predicted Functional Partners:
RMCT_0979
Cytochrome P450.
 
   0.767
FabG_16
Dehydrogenase.
 
    
0.743
YcdF_3
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein.
 
    0.739
SubB_2
Ferredoxin.
 
     0.713
KasA_2
Fatty acid synthase.
  
 0.707
FabG_8
Oxidoreductase.
  
     0.689
FabG_11
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein.
  
     0.679
RMCT_0425
Mycofactocin system RPExFGAL protein.
 
   
 0.675
MoaA_1
Radical SAM peptide maturase, mycofactocin system.
 
  
 0.663
FabG_26
Dehydrogenase.
  
     0.656
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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