STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0983Amidohydrolase. (380 aa)    
Predicted Functional Partners:
BphA3
Rieske (2Fe-2S) protein.
 
     0.969
MhpC
Alpha/beta hydrolase.
 
   
 0.968
RMCT_0982
Amidohydrolase.
 
    
0.883
SuaB_2
Ferredoxin.
 
     0.763
RMCT_0958
TetR family transcriptional regulator.
 
     0.737
PknD
SMP-30/gluconolaconase/LRE domain-containing protein.
 
    0.734
RMCT_2150
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
     0.712
RMCT_1304
Amidohydrolase.
  
     0.707
RMCT_2797
TetR family transcriptional regulator.
 
     0.707
RMCT_0990
Thioesterase.
 
     0.694
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.