STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0989acetyl-CoA acetyltransferase. (547 aa)    
Predicted Functional Partners:
RMCT_0990
Thioesterase.
 
   
 0.948
RMCT_3980
Putative uncharacterized protein.
  
 0.947
FadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 0.923
SuaB_2
Ferredoxin.
 
     0.913
Nqo1_2
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit.
  
 
 0.900
GarR_1
6-phosphogluconate dehydrogenase.
  
  
 0.876
GarR_2
6-phosphogluconate dehydrogenase.
  
  
 0.876
RMCT_3405
acyl-CoA dehydrogenase.
 
 0.809
RMCT_1721
acyl-CoA dehydrogenase.
 
 0.798
EchA8_11
enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.797
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.