STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EthR_5Transcriptional regulator. (212 aa)    
Predicted Functional Partners:
QorA_3
Zn-dependent oxidoreductase.
     
 0.717
BbsG_9
acyl-CoA dehydrogenase domain-containing protein.
       0.701
RMCT_1026
Aminoglycoside phosphotransferase.
       0.701
AcrR_2
TetR family transcriptional regulator.
 
     0.554
YccS
Putative uncharacterized protein.
 
    0.523
RMCT_1474
Putative uncharacterized protein.
 
   
 0.498
RMCT_0418
Cutinase.
 
    0.458
RMCT_2436
Putative uncharacterized protein.
  
     0.448
RMCT_0121
Phage integrase family protein.
  
  
 0.444
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.443
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.