Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BphJ | FadA6_2 | RMCT_1944 | RMCT_1031 | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.907 |
| BphJ | MmsA | RMCT_1944 | RMCT_0519 | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | Methylmalonate-semialdehyde dehydrogenase. | 0.824 |
| BphJ | RMCT_1668 | RMCT_1944 | RMCT_1668 | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | acetyl-CoA acetyltransferase. | 0.900 |
| BphJ | YngG_1 | RMCT_1944 | RMCT_3042 | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | hydroxymethylglutaryl-CoA lyase. | 0.853 |
| BphJ | YngG_2 | RMCT_1944 | RMCT_1822 | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.853 |
| FadA6_2 | BphJ | RMCT_1031 | RMCT_1944 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | 0.907 |
| FadA6_2 | FadJ | RMCT_1031 | RMCT_1791 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.992 |
| FadA6_2 | MmsA | RMCT_1031 | RMCT_0519 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Methylmalonate-semialdehyde dehydrogenase. | 0.917 |
| FadA6_2 | RMCT_1030 | RMCT_1031 | RMCT_1030 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acyl-CoA dehydrogenase. | 0.939 |
| FadA6_2 | RMCT_1476 | RMCT_1031 | RMCT_1476 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acyl CoA dehydrogenase. | 0.945 |
| FadA6_2 | RMCT_1668 | RMCT_1031 | RMCT_1668 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase. | 0.911 |
| FadA6_2 | RMCT_3765 | RMCT_1031 | RMCT_3765 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acyl-CoA oxidase. | 0.945 |
| FadA6_2 | RMCT_3980 | RMCT_1031 | RMCT_3980 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Putative uncharacterized protein. | 0.991 |
| FadA6_2 | YngG_1 | RMCT_1031 | RMCT_3042 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | hydroxymethylglutaryl-CoA lyase. | 0.933 |
| FadA6_2 | YngG_2 | RMCT_1031 | RMCT_1822 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.933 |
| FadJ | FadA6_2 | RMCT_1791 | RMCT_1031 | 3-hydroxyacyl-CoA dehydrogenase. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.992 |
| FadJ | MmsA | RMCT_1791 | RMCT_0519 | 3-hydroxyacyl-CoA dehydrogenase. | Methylmalonate-semialdehyde dehydrogenase. | 0.944 |
| FadJ | RMCT_1030 | RMCT_1791 | RMCT_1030 | 3-hydroxyacyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.922 |
| FadJ | RMCT_1476 | RMCT_1791 | RMCT_1476 | 3-hydroxyacyl-CoA dehydrogenase. | Acyl CoA dehydrogenase. | 0.906 |
| FadJ | RMCT_1668 | RMCT_1791 | RMCT_1668 | 3-hydroxyacyl-CoA dehydrogenase. | acetyl-CoA acetyltransferase. | 0.945 |
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