STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FabG_18Hypothetical protein. (252 aa)    
Predicted Functional Partners:
KasA_2
Fatty acid synthase.
  
 0.977
RMCT_1947
Dehydrogenase.
 
 0.911
RMCT_0603
Dehydrogenase.
 
 0.891
RMCT_1034
acyl-CoA dehydrogenase.
  
 0.889
FabH_2
3-oxoacyl-(acyl-carrier-protein) synthase III.
 
 
 0.769
EchA8_26
enoyl-CoA hydratase/carnithine racemase.
  
 0.738
FabH_1
3-oxoacyl-ACP synthase.
  
 
 0.738
PqsD
3-oxoacyl-(acyl-carrier-protein) synthase III.
  
 
 0.735
RMCT_1030
acyl-CoA dehydrogenase.
 
 0.729
Frc_11
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
   
   0.719
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.