STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1035Amidohydrolase. (61 aa)    
Predicted Functional Partners:
RMCT_1034
acyl-CoA dehydrogenase.
       0.513
BetC
Hydrolase.
  
 
 0.491
RMCT_2725
Lipoprotein aminopeptidase lpqL.
  
 
  0.460
FabG_18
Hypothetical protein.
  
    0.449
AtsA
Arylsulfatase atsA.
  
 
  0.448
AtsA_1
Arylsulfatase AtsA.
  
 
  0.448
RMCT_1441
Sulfatase family protein.
  
 
  0.448
RMCT_1996
Lipoprotein lprE.
    
 0.443
Frc_11
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
    0.405
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.