Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EccA1_1 | EccB1_1 | RMCT_1055 | RMCT_1054 | Type VII secretion AAA-ATPase EccA. | Type VII secretion protein EccB, Actinobacterial. | 0.927 |
EccA1_1 | EccCa1_1 | RMCT_1055 | RMCT_1053 | Type VII secretion AAA-ATPase EccA. | Transmembrane protein. | 0.912 |
EccA1_1 | EccCb1 | RMCT_1055 | RMCT_1052 | Type VII secretion AAA-ATPase EccA. | Cell division protein FtsK. | 0.885 |
EccA1_1 | EccD1 | RMCT_1055 | RMCT_1046 | Type VII secretion AAA-ATPase EccA. | Transmembrane protein. | 0.696 |
EccA1_1 | EccE1 | RMCT_1055 | RMCT_2096 | Type VII secretion AAA-ATPase EccA. | Predicted protein. | 0.728 |
EccA1_1 | EspG1_1 | RMCT_1055 | RMCT_1056 | Type VII secretion AAA-ATPase EccA. | ESX-1 secretion-associated protein EspG1. | 0.925 |
EccA1_1 | EsxA | RMCT_1055 | RMCT_1048 | Type VII secretion AAA-ATPase EccA. | 6 kDa early secretory antigenic target esxA, Esat-6; Belongs to the WXG100 family. | 0.574 |
EccA1_1 | EsxB | RMCT_1055 | RMCT_1049 | Type VII secretion AAA-ATPase EccA. | WXG repeat protein; Belongs to the WXG100 family. | 0.587 |
EccA1_1 | RMCT_2095 | RMCT_1055 | RMCT_2095 | Type VII secretion AAA-ATPase EccA. | Membrane-anchored mycosin mycP1. | 0.547 |
EccB1_1 | EccA1_1 | RMCT_1054 | RMCT_1055 | Type VII secretion protein EccB, Actinobacterial. | Type VII secretion AAA-ATPase EccA. | 0.927 |
EccB1_1 | EccCa1_1 | RMCT_1054 | RMCT_1053 | Type VII secretion protein EccB, Actinobacterial. | Transmembrane protein. | 0.981 |
EccB1_1 | EccCb1 | RMCT_1054 | RMCT_1052 | Type VII secretion protein EccB, Actinobacterial. | Cell division protein FtsK. | 0.986 |
EccB1_1 | EccD1 | RMCT_1054 | RMCT_1046 | Type VII secretion protein EccB, Actinobacterial. | Transmembrane protein. | 0.917 |
EccB1_1 | EccE1 | RMCT_1054 | RMCT_2096 | Type VII secretion protein EccB, Actinobacterial. | Predicted protein. | 0.965 |
EccB1_1 | EspG1_1 | RMCT_1054 | RMCT_1056 | Type VII secretion protein EccB, Actinobacterial. | ESX-1 secretion-associated protein EspG1. | 0.933 |
EccB1_1 | EsxA | RMCT_1054 | RMCT_1048 | Type VII secretion protein EccB, Actinobacterial. | 6 kDa early secretory antigenic target esxA, Esat-6; Belongs to the WXG100 family. | 0.534 |
EccB1_1 | EsxB | RMCT_1054 | RMCT_1049 | Type VII secretion protein EccB, Actinobacterial. | WXG repeat protein; Belongs to the WXG100 family. | 0.650 |
EccB1_1 | RMCT_2095 | RMCT_1054 | RMCT_2095 | Type VII secretion protein EccB, Actinobacterial. | Membrane-anchored mycosin mycP1. | 0.864 |
EccB1_3 | EccCa1_1 | RMCT_0535 | RMCT_1053 | Putative uncharacterized protein. | Transmembrane protein. | 0.869 |
EccB1_3 | EccCb1 | RMCT_0535 | RMCT_1052 | Putative uncharacterized protein. | Cell division protein FtsK. | 0.865 |
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