STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YhhW_1Pirin-related protein; Belongs to the pirin family. (323 aa)    
Predicted Functional Partners:
RMCT_1064
Acetyltransferase.
 
    0.831
RMCT_1062
Uncharacterized protein.
       0.583
SsuD_1
Alkanesulfonate monooxygenase.
  
  
 0.548
LimB_2
Alkanal monooxygenase subunit alpha.
  
  
 0.483
LimB_6
Monooxygenase.
  
  
 0.483
RMCT_1065
Putative uncharacterized protein.
       0.465
RMCT_4559
Stage II sporulation protein E.
  
  
 0.459
Fgd_4
Luciferase-like protein.
 
  
 0.440
RMCT_1404
NAD dependent epimerase/dehydratase.
  
  
 0.429
RMCT_3550
NAD-dependent epimerase/dehydratase.
  
  
 0.429
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.