STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1064Acetyltransferase. (109 aa)    
Predicted Functional Partners:
YhhW_1
Pirin-related protein; Belongs to the pirin family.
 
    0.831
RMCT_1065
Putative uncharacterized protein.
 
   
 0.704
RMCT_1404
NAD dependent epimerase/dehydratase.
 
  
 0.680
RMCT_1504
CsbD family protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.670
RMCT_3550
NAD-dependent epimerase/dehydratase.
  
  
 0.630
PrpB
PEP phosphonomutase-like enzyme.
 
    0.517
YyaP_2
Deaminase-reductase domain-containing protein.
 
    0.505
RMCT_0240
Polyketide cyclase / dehydrase family protein.
     
 0.497
RMCT_3922
NAD-dependent nucleoside-diphosphate sugar epimerase.
  
    0.493
RMCT_0820
Isochorismatase hydrolase.
 
    0.492
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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