STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1067Pyridoxamine 5'-phosphate oxidase-like protein. (170 aa)    
Predicted Functional Partners:
Ddn_1
Deazaflavin-dependent nitroreductase family protein.
 
   
 0.889
RMCT_1068
Putative uncharacterized protein.
       0.615
RMCT_3081
PPOX class probable F420-dependent enzyme.
  
   
 0.579
RMCT_1504
CsbD family protein; Belongs to the UPF0337 (CsbD) family.
  
    0.567
RMCT_4129
UspA domain-containing protein.
  
  
 0.547
RMCT_4399
Hypothetical protein.
      
 0.524
Ddn_2
aclJ protein.
 
   
 0.511
RMCT_1407
Hypothetical protein.
  
     0.487
RMCT_1735
Polyketide cyclase / dehydrase and lipid transport.
  
     0.485
RMCT_0650
Integral membrane protein.
 
    0.483
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.