STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GmhAPhosphoheptose isomerase. (239 aa)    
Predicted Functional Partners:
RMCT_1077
Phosphoheptose isomerase.
 
     0.915
GmhA1
Phosphoheptose isomerase.
  
  
 
0.902
NfuA
Rieske (2Fe-2S) protein.
 
     0.826
HypF
Hydrogenase maturation factor, HypF.
     
 0.816
RMCT_1080
NHL repeat-containing protein.
 
     0.812
RMCT_1082
Uncharacterized protein.
 
     0.811
HypE_1
Hydrogenase expression/formation protein HypE.
     
 0.806
RMCT_1078
Hydrogenase assembly chaperone HypC/HupF.
       0.796
RMCT_1085
Nickel-dependent hydrogenase large subunit.
     
 0.796
HybD
Hydrogenase maturation protease.
     
 0.793
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.