STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1087Uncharacterized protein. (181 aa)    
Predicted Functional Partners:
HydA
NADH ubiquinone oxidoreductase, 20 kDa subunit.
   
 
 0.961
RMCT_0721
Hydrogenase small subunit.
   
 
 0.921
RMCT_1085
Nickel-dependent hydrogenase large subunit.
   
 
 0.890
RMCT_0722
Hydrogen:quinone oxidoreductase.
   
 
 0.818
NarB
Sulfite reductase (NADPH) subunit alpha.
  
  
 0.700
hypA
Hydrogenase expression/synthesis, HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
     
 0.606
FccB
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
    0.553
BedA
NAD(FAD)-dependent dehydrogenase.
  
    0.553
NfuA
Rieske (2Fe-2S) protein.
     
 0.509
RhaS_1
Transcriptional regulator.
       0.499
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.