STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypAHydrogenase expression/synthesis, HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (111 aa)    
Predicted Functional Partners:
HypB
Hydrogenase accessory protein HypB.
 
 
 0.994
ureG
Urease accessory protein ureG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
 
 0.909
RMCT_1085
Nickel-dependent hydrogenase large subunit.
 
 
 0.909
HypC_1
Hydrogenase maturation factor, HypC.
 
  
 0.876
HypD_1
Hydrogenase expression/formation protein HypD.
 
  
 0.872
RMCT_0729
Hydrogenase assembly chaperone HypC/HupF.
 
  
 0.863
HypF
Hydrogenase maturation factor, HypF.
 
   
 0.862
RMCT_1078
Hydrogenase assembly chaperone HypC/HupF.
 
  
 0.858
HypC_2
Hydrogenase maturation protein HypC.
 
  
 0.856
HypE_1
Hydrogenase expression/formation protein HypE.
 
  
 0.851
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.