Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PbpA_1Penicillin-binding protein pbpA. (491 aa)    
Predicted Functional Partners:
FtsW_1
Cell division protein rodA; Belongs to the SEDS family.
 
 0.999
DacB_4
D-alanyl-D-alanine carboxypeptidase.
     
 0.962
DacB_1
Penicillin-binding protein dacB1; Belongs to the peptidase S11 family.
 
 
 0.957
FtsW_2
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.954
DacB_2
D-alanyl-D-alanine carboxypeptidase dacB2; Belongs to the peptidase S11 family.
 
 
 0.945
DacB_3
D-alanyl-D-alanine carboxypeptidase dacB2; Belongs to the peptidase S11 family.
 
 
 0.945
RMCT_1095
FHA domain-containing protein.
 
   
 0.944
PenA
Penicillin-binding membrane protein pbpB.
  
  
0.941
PstP
Serine/threonine phosphatase ppp.
  
  
 0.935
Pon1
Bifunctional membrane-associated penicillin-binding protein 1A/1B ponA2 : penicillin-insensitive transglycosylase + penicillin-sensitive transpeptidase.
 
 
 0.927
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.