Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1102Hypothetical protein. (285 aa)    
Predicted Functional Partners:
RMCT_0380
Integral membrane protein.
 
  
 0.881
RMCT_0379
Hypothetical protein.
  
     0.774
TrpG
Para-aminobenzoate synthase component II.
       0.754
crgA
Septation inhibitor protein; Involved in cell division; Belongs to the CrgA family.
       0.666
RMCT_0635
Transposase.
  
    0.490
RMCT_0316
Carboxymuconolactone decarboxylase.
  
    0.454
RMCT_1104
Protein of unknown function.
       0.442
RMCT_1545
Transglycosylase domain-containing protein.
  
     0.426
RibBA_1
3,4-dihydroxy-2-butanone 4-phosphate synthase.
   
    0.414
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
   
    0.414
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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