Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DivIVA | PbpA_1 | RMCT_3920 | RMCT_1098 | DivIVA domain protein. | Penicillin-binding protein pbpA. | 0.837 |
DivIVA | PenA | RMCT_3920 | RMCT_3906 | DivIVA domain protein. | Penicillin-binding membrane protein pbpB. | 0.890 |
DivIVA | crgA | RMCT_3920 | RMCT_1103 | DivIVA domain protein. | Septation inhibitor protein; Involved in cell division; Belongs to the CrgA family. | 0.904 |
DivIVA | cwsA | RMCT_3920 | RMCT_1106 | DivIVA domain protein. | Conserved membrane protein of unknown function; Required for regulated cell division, cell wall synthesis and the maintenance of cell shape; Belongs to the CwsA family. | 0.873 |
DivIVA | ftsZ | RMCT_3920 | RMCT_3915 | DivIVA domain protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.921 |
PbpA_1 | DivIVA | RMCT_1098 | RMCT_3920 | Penicillin-binding protein pbpA. | DivIVA domain protein. | 0.837 |
PbpA_1 | PenA | RMCT_1098 | RMCT_3906 | Penicillin-binding protein pbpA. | Penicillin-binding membrane protein pbpB. | 0.939 |
PbpA_1 | crgA | RMCT_1098 | RMCT_1103 | Penicillin-binding protein pbpA. | Septation inhibitor protein; Involved in cell division; Belongs to the CrgA family. | 0.898 |
PbpA_1 | cwsA | RMCT_1098 | RMCT_1106 | Penicillin-binding protein pbpA. | Conserved membrane protein of unknown function; Required for regulated cell division, cell wall synthesis and the maintenance of cell shape; Belongs to the CwsA family. | 0.489 |
PbpA_1 | ftsZ | RMCT_1098 | RMCT_3915 | Penicillin-binding protein pbpA. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.659 |
PenA | DivIVA | RMCT_3906 | RMCT_3920 | Penicillin-binding membrane protein pbpB. | DivIVA domain protein. | 0.890 |
PenA | PbpA_1 | RMCT_3906 | RMCT_1098 | Penicillin-binding membrane protein pbpB. | Penicillin-binding protein pbpA. | 0.939 |
PenA | crgA | RMCT_3906 | RMCT_1103 | Penicillin-binding membrane protein pbpB. | Septation inhibitor protein; Involved in cell division; Belongs to the CrgA family. | 0.817 |
PenA | cwsA | RMCT_3906 | RMCT_1106 | Penicillin-binding membrane protein pbpB. | Conserved membrane protein of unknown function; Required for regulated cell division, cell wall synthesis and the maintenance of cell shape; Belongs to the CwsA family. | 0.520 |
PenA | ftsZ | RMCT_3906 | RMCT_3915 | Penicillin-binding membrane protein pbpB. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.922 |
PpiA | cwsA | RMCT_1105 | RMCT_1106 | Iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Conserved membrane protein of unknown function; Required for regulated cell division, cell wall synthesis and the maintenance of cell shape; Belongs to the CwsA family. | 0.589 |
RMCT_2893 | cwsA | RMCT_2893 | RMCT_1106 | acyl-CoA dehydrogenase fadE33. | Conserved membrane protein of unknown function; Required for regulated cell division, cell wall synthesis and the maintenance of cell shape; Belongs to the CwsA family. | 0.618 |
crgA | DivIVA | RMCT_1103 | RMCT_3920 | Septation inhibitor protein; Involved in cell division; Belongs to the CrgA family. | DivIVA domain protein. | 0.904 |
crgA | PbpA_1 | RMCT_1103 | RMCT_1098 | Septation inhibitor protein; Involved in cell division; Belongs to the CrgA family. | Penicillin-binding protein pbpA. | 0.898 |
crgA | PenA | RMCT_1103 | RMCT_3906 | Septation inhibitor protein; Involved in cell division; Belongs to the CrgA family. | Penicillin-binding membrane protein pbpB. | 0.817 |
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