STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1131NUDIX hydrolase; Belongs to the Nudix hydrolase family. (300 aa)    
Predicted Functional Partners:
RMCT_1130
Hypothetical protein.
  
  
 0.940
MurJ
Transmembrane protein.
       0.883
RMCT_1127
Putative uncharacterized protein.
     
 0.715
Cca
poly(A) polymerase pcnA; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.640
RpoE_4
RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.632
RMCT_2848
DivIVA domain-containing protein.
 
    0.567
Crp
Cpr/FNR family transcriptional regulator.
 
  
 0.536
RMCT_1133
Hypothetical protein.
     
 0.526
RMCT_0736
Protein of unknown function.
  
   
 0.520
TrxB
Thioredoxin reductase.
     
 0.470
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.