Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
RMCT_1160Phytoene dehydrogenase-like oxidoreductase. (471 aa)    
Predicted Functional Partners:
RMCT_1161
Transmembrane protein of unknown function.
 
     0.899
RMCT_1163
Putative uncharacterized protein.
 
     0.734
FadD_21
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
       0.704
BchI_1
Magnesium chelatase.
  
  
 0.519
CrtM
Phytoene synthase.
  
  
 0.505
CobN
Cobalamin biosynthesis protein cobN.
  
  
 0.478
BchI_2
Magnesium chelatase.
  
  
 0.454
RMCT_3787
Putative uncharacterized protein.
 
     0.430
RMCT_1164
Alpha/beta hydrolase.
       0.411
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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