STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CelACellulase celA1; Belongs to the glycosyl hydrolase family 6. (326 aa)    
Predicted Functional Partners:
GlcA
Glycoside hydrolase family protein.
 
   
 0.878
RMCT_1193
Methyltransferase.
 
    0.698
Cut4
Cutinase Cut4; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.
 
 
 0.611
glgE
Glucanase glgE; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
  
 0.611
FadD_20
AMP-dependent synthetase and ligase.
       0.598
RMCT_4657
Erp protein.
 
 
 0.546
EccB1_2
Type VII secretion protein EccB, Actinobacterial.
 
 
 
 0.526
RMCT_1192
Dehydratase.
       0.517
RMCT_1150
Protein of unknown function.
 
 
 
 0.516
Snm
Transmembrane protein.
  
     0.507
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.