STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NamANADH:flavin oxidoreductase. (360 aa)    
Predicted Functional Partners:
RMCT_1199
Putative uncharacterized protein.
       0.592
RMCT_3339
Transcription factor.
  
    0.546
MscS_2
Small-conductance mechanosensitive channel.
  
    0.529
EtfB
Electron transfer flavoprotein beta subunit fixA.
  
 
 0.497
MdlB
L-lactate dehydrogenase (cytochrome) lldD2.
  
  
 0.465
LldD
L-lactate dehydrogenase (cytochrome) lldD1.
  
  
 0.465
RMCT_4229
Lactate 2-monooxygenase.
  
  
 0.465
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 0.464
FbpC_5
Esterase.
  
  
 0.464
CspA
Cold shock protein A cspA.
  
  
 0.460
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.