Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MmpL4bMembrane protein mmpL4. (966 aa)    
Predicted Functional Partners:
RMCT_1206
Mycobacterium membrane protein.
       0.773
MmpL8_6
Membrane protein mmpL4.
 
    
0.766
RMCT_2223
PPE family protein.
  
   
 0.740
Snm
Transmembrane protein.
  
   
 0.731
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.699
RMCT_3117
ATP synthase I chain.
  
     0.680
EccB1_2
Type VII secretion protein EccB, Actinobacterial.
 
 
 
 0.646
RMCT_4420
Deazaflavin-dependent nitroreductase family protein.
  
     0.645
RMCT_2656
acyl-ACP thioesterase.
  
     0.592
RMCT_3585
Pyrrolo-quinoline quinone.
  
     0.585
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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