STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HcaRTranscriptional regulator. (214 aa)    
Predicted Functional Partners:
GltB
Ferredoxin-dependent glutamate synthase, large subunit gltB.
  
  
 0.652
RMCT_1211
acyl-CoA synthetase.
     
 0.570
FadD_19
AMP-dependent synthetase and ligase.
     
 0.570
IdeR_1
Transcriptional repressor sirR.
  
 
 0.567
KstR2_9
Transcriptional regulator.
 
 
 
 0.481
IdeR_2
Iron-dependent repressor and activator ideR.
  
 
 0.456
YybR
HxlR family transcriptional regulator.
  
  
 0.453
IclR_1
Transcriptional regulator.
  
  
 0.449
recA
Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.441
MsrR_3
Transcriptional regulator.
  
  
 0.431
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.