Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CofD | LimB_5 | RMCT_2288 | RMCT_2872 | LPPG:FO 2-phospho-L-lactate transferase. | Flavin-dependent oxidoreductase. | 0.451 |
CofD | LuxA_4 | RMCT_2288 | RMCT_1010 | LPPG:FO 2-phospho-L-lactate transferase. | Luciferase family protein. | 0.632 |
CofD | RMCT_1224 | RMCT_2288 | RMCT_1224 | LPPG:FO 2-phospho-L-lactate transferase. | Luciferase-like protein. | 0.639 |
CofD | RMCT_1930 | RMCT_2288 | RMCT_1930 | LPPG:FO 2-phospho-L-lactate transferase. | Coenzyme F420-dependent oxidoreductase. | 0.752 |
CofD | RMCT_2213 | RMCT_2288 | RMCT_2213 | LPPG:FO 2-phospho-L-lactate transferase. | F420-dependent oxidoreductase, MSMEG_4879 family. | 0.615 |
CofD | RMCT_2287 | RMCT_2288 | RMCT_2287 | LPPG:FO 2-phospho-L-lactate transferase. | F420-0--gamma-glutamyl ligase. | 0.999 |
CofD | RMCT_4399 | RMCT_2288 | RMCT_4399 | LPPG:FO 2-phospho-L-lactate transferase. | Hypothetical protein. | 0.777 |
LimB_5 | CofD | RMCT_2872 | RMCT_2288 | Flavin-dependent oxidoreductase. | LPPG:FO 2-phospho-L-lactate transferase. | 0.451 |
LimB_5 | LuxA_4 | RMCT_2872 | RMCT_1010 | Flavin-dependent oxidoreductase. | Luciferase family protein. | 0.537 |
LimB_5 | RMCT_1224 | RMCT_2872 | RMCT_1224 | Flavin-dependent oxidoreductase. | Luciferase-like protein. | 0.700 |
LimB_5 | RMCT_1930 | RMCT_2872 | RMCT_1930 | Flavin-dependent oxidoreductase. | Coenzyme F420-dependent oxidoreductase. | 0.467 |
LimB_5 | RMCT_2287 | RMCT_2872 | RMCT_2287 | Flavin-dependent oxidoreductase. | F420-0--gamma-glutamyl ligase. | 0.472 |
LimB_5 | SsuA | RMCT_2872 | RMCT_3599 | Flavin-dependent oxidoreductase. | Putative uncharacterized protein. | 0.462 |
LimB_5 | SsuC | RMCT_2872 | RMCT_3600 | Flavin-dependent oxidoreductase. | Transporter. | 0.440 |
LuxA_4 | CofD | RMCT_1010 | RMCT_2288 | Luciferase family protein. | LPPG:FO 2-phospho-L-lactate transferase. | 0.632 |
LuxA_4 | LimB_5 | RMCT_1010 | RMCT_2872 | Luciferase family protein. | Flavin-dependent oxidoreductase. | 0.537 |
LuxA_4 | RMCT_1224 | RMCT_1010 | RMCT_1224 | Luciferase family protein. | Luciferase-like protein. | 0.535 |
LuxA_4 | RMCT_2287 | RMCT_1010 | RMCT_2287 | Luciferase family protein. | F420-0--gamma-glutamyl ligase. | 0.633 |
LuxA_4 | RMCT_4399 | RMCT_1010 | RMCT_4399 | Luciferase family protein. | Hypothetical protein. | 0.514 |
LuxA_4 | SsuA | RMCT_1010 | RMCT_3599 | Luciferase family protein. | Putative uncharacterized protein. | 0.462 |
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