STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FdmAlcohol dehydrogenase. (389 aa)    
Predicted Functional Partners:
YdaD_2
Short-chain dehydrogenase/reductase SDR.
 
  
 0.730
YfkM
Intracellular protease, PfpI family.
 
  
 0.718
Fgd1_6
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase.
 
   
 0.679
PetC1
glycine/D-amino acid oxidase, deaminating.
 
  
 0.624
RMCT_1253
Putative uncharacterized protein.
       0.553
KatA
Catalase.
  
 
 0.551
KatE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.551
TreZ
Maltooligosyltrehalose trehalohydrolase treZ.
 
  
 0.550
RMCT_1252
acyl-CoA dehydrogenase domain-containing protein.
  
  
 0.523
Adh_1
Alcohol dehydrogenase GroES domain-containing protein.
 
 
0.504
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.