Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KstR_5TetR family transcriptional regulator. (208 aa)    
Predicted Functional Partners:
RMCT_1257
Putative uncharacterized protein.
 
     0.865
RMCT_1258
Putative uncharacterized protein.
 
     0.864
RMCT_0990
Thioesterase.
 
     0.712
YvdT_3
TetR family transcriptional regulator.
  
     0.677
RMCT_3402
Amidohydrolase.
 
     0.672
RMCT_0952
Amidohydrolase 2.
 
     0.650
PknD
SMP-30/gluconolaconase/LRE domain-containing protein.
 
   
 0.635
RMCT_3405
acyl-CoA dehydrogenase.
 
     0.614
RMCT_0020
MorD protein.
 
     0.611
MhpC
Alpha/beta hydrolase.
 
     0.574
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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