Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1262Putative uncharacterized protein. (136 aa)    
Predicted Functional Partners:
RMCT_1263
Putative uncharacterized protein.
 
     0.965
RMCT_1260
Putative uncharacterized protein.
 
     0.900
RMCT_1264
RNA-binding protein with PAS domain.
 
     0.789
RMCT_1261
Putative uncharacterized protein.
       0.714
CzcD
Cation diffusion facilitator family transporter.
  
 0.670
Rmt3
macrocin-O-methyltransferase.
 
 
 
 0.667
RMCT_0316
Carboxymuconolactone decarboxylase.
 
   
 0.651
RMCT_2108
TPR repeat-containing protein.
 
 0.632
RMCT_2572
Putative Mce family protein.
 
     0.624
RMCT_2071
Putative uncharacterized protein.
 
 
 0.619
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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