Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_1290Hydrolase. (246 aa)    
Predicted Functional Partners:
KojP
Glycosyl transferase.
  
 0.997
RMCT_1451
Trehalose-phosphatase.
  
 0.983
OtsB
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 0.945
RMCT_4221
Putative uncharacterized protein.
  
    0.787
YdaD_2
Short-chain dehydrogenase/reductase SDR.
   
 
 0.636
PfkB_1
6-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
    0.510
AcoB
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit.
  
  
 0.491
PfkB_2
Ribokinase-like domain-containing protein.
 
    0.482
HsrA
Arabinose efflux permease family protein.
  
  
 0.480
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.466
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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