Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YdaD_2Short-chain dehydrogenase/reductase SDR. (279 aa)    
Predicted Functional Partners:
PetC1
glycine/D-amino acid oxidase, deaminating.
 
 0.830
Fdm
Alcohol dehydrogenase.
 
  
 0.725
KasA_2
Fatty acid synthase.
  
 0.707
KatE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
 0.695
RMCT_1290
Hydrolase.
   
 
 0.636
RMCT_2262
Topoisomerase IB.
 
 
 
 0.617
KatA
Catalase.
  
 0.599
RMCT_3370
Acyl dehydratase.
  
 0.555
KojP
Glycosyl transferase.
       0.553
FadJ
3-hydroxyacyl-CoA dehydrogenase.
  
 0.552
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.