STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1295Lipoprotein lpqD. (235 aa)    
Predicted Functional Partners:
RMCT_1294
Putative uncharacterized protein.
       0.689
StrE_2
Dihydroflavonol-4-reductase family protein.
     
 0.547
FtsH2
ATPase central domain-containing protein; Belongs to the AAA ATPase family.
   
  0.517
EccA1_1
Type VII secretion AAA-ATPase EccA.
   
  0.517
FtsH3
ATPase; Belongs to the AAA ATPase family.
   
  0.517
EccA1_2
ATPase central domain-containing protein.
   
  0.517
CobI_1
Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase; Bifunctional protein, cobI-cobJ fusion protein: S-adenosyl-L-methionine-precorrin-2 methyl transferase + precorrin-3 methylase; Belongs to the precorrin methyltransferase family.
  
  
 0.509
glsA
Glutaminase; Belongs to the glutaminase family.
  
 0.507
RMCT_2281
TIGR03089 family protein.
 
 
  0.499
RMCT_4575
Putative uncharacterized protein.
   
 0.499
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.