Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Fgd_5Luciferase family protein. (306 aa)    
Predicted Functional Partners:
GluP
Integral membrane protein.
       0.762
RutA_2
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase.
  
   
 0.683
RMCT_2213
F420-dependent oxidoreductase, MSMEG_4879 family.
  
     0.682
RMCT_1298
Transcriptional regulator.
       0.541
RMCT_1299
Transmembrane protein.
       0.541
RMCT_1300
Truncated hemoglobin.
  
    0.540
LuxA_4
Luciferase family protein.
  
     0.521
RMCT_4121
F420-dependent oxidoreductase, MSMEG_4879 family.
  
     0.495
SsuC
Transporter.
 
  
 0.487
RMCT_2287
F420-0--gamma-glutamyl ligase.
 
  
 0.481
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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