STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1307Periplasmic binding protein. (346 aa)    
Predicted Functional Partners:
RMCT_1308
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.987
HmuV
Iron siderophore/cobalamin ABC transporter ATP-binding protein.
 
 
 0.984
YvrB
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.922
FhuC
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component.
 
 
 0.917
RMCT_2681
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.904
YusV_1
ABC transporter ATP-binding protein.
 
 
 0.858
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
  
 0.781
PbpE_2
Lipase lipE.
     
 0.633
RMCT_1310
Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands.
       0.610
RMCT_0798
PemK-like protein.
  
  
 0.568
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.