Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_1308ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (339 aa)    
Predicted Functional Partners:
RMCT_1307
Periplasmic binding protein.
 
 
 0.984
HmuV
Iron siderophore/cobalamin ABC transporter ATP-binding protein.
 
 
 0.982
FhuC
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component.
 
 
 0.926
YusV_1
ABC transporter ATP-binding protein.
 
 
 0.924
HmuT
ABC transporter substrate-binding protein.
 
 
 0.882
RMCT_0220
Periplasmic binding protein.
 
 
 0.806
YfiY
Fe(III)-dicitrate-binding periplasmic lipoprotein fecB.
 
 
 0.684
PbpE_2
Lipase lipE.
     
 0.627
RMCT_1310
Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands.
       0.610
RMCT_1312
propionyl-CoA carboxylase.
     
 0.556
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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