STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PbpE_2Lipase lipE. (421 aa)    
Predicted Functional Partners:
RMCT_1310
Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands.
       0.878
RMCT_1312
propionyl-CoA carboxylase.
 
     0.714
RMCT_0404
Hypothetical protein.
  
     0.659
RMCT_1307
Periplasmic binding protein.
     
 0.633
RMCT_1308
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
     
 0.631
HmuV
Iron siderophore/cobalamin ABC transporter ATP-binding protein.
       0.607
RMCT_4061
Prolyl oligopeptidase family protein.
 
     0.573
Ksi_1
Nuclear transport factor 2.
  
     0.570
EchA8_30
enoyl-CoA hydratase.
       0.508
RMCT_1480
Lipolytic enzyme, G-D-S-L.
     
 0.485
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.