Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C2-hpah | FabG_31 | RMCT_3184 | RMCT_1341 | acyl-CoA dehydrogenase type 2. | Dehydrogenase. | 0.621 |
C2-hpah | FabG_32 | RMCT_3184 | RMCT_1342 | acyl-CoA dehydrogenase type 2. | Short-chain dehydrogenase/reductase SDR. | 0.511 |
C2-hpah | HhoB_2 | RMCT_3184 | RMCT_0045 | acyl-CoA dehydrogenase type 2. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.485 |
C2-hpah | KasA_2 | RMCT_3184 | RMCT_0942 | acyl-CoA dehydrogenase type 2. | Fatty acid synthase. | 0.599 |
C2-hpah | Oxc | RMCT_3184 | RMCT_1716 | acyl-CoA dehydrogenase type 2. | Thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family. | 0.590 |
FabD | FabG_31 | RMCT_3817 | RMCT_1341 | Malonyl CoA-acyl carrier protein transacylase fabD. | Dehydrogenase. | 0.631 |
FabD | FabG_32 | RMCT_3817 | RMCT_1342 | Malonyl CoA-acyl carrier protein transacylase fabD. | Short-chain dehydrogenase/reductase SDR. | 0.583 |
FabD | KasA_2 | RMCT_3817 | RMCT_0942 | Malonyl CoA-acyl carrier protein transacylase fabD. | Fatty acid synthase. | 0.980 |
FabG_31 | C2-hpah | RMCT_1341 | RMCT_3184 | Dehydrogenase. | acyl-CoA dehydrogenase type 2. | 0.621 |
FabG_31 | FabD | RMCT_1341 | RMCT_3817 | Dehydrogenase. | Malonyl CoA-acyl carrier protein transacylase fabD. | 0.631 |
FabG_31 | FabG_32 | RMCT_1341 | RMCT_1342 | Dehydrogenase. | Short-chain dehydrogenase/reductase SDR. | 0.810 |
FabG_31 | FabG_9 | RMCT_1341 | RMCT_0478 | Dehydrogenase. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.627 |
FabG_31 | HhoB_2 | RMCT_1341 | RMCT_0045 | Dehydrogenase. | Trypsin-like serine protease with C-terminal PDZ domain. | 0.620 |
FabG_31 | HsaA_1 | RMCT_1341 | RMCT_0485 | Dehydrogenase. | Hydroxylase. | 0.650 |
FabG_31 | HsaA_2 | RMCT_1341 | RMCT_0591 | Dehydrogenase. | Pigment production hydroxylase. | 0.653 |
FabG_31 | HsaA_3 | RMCT_1341 | RMCT_3046 | Dehydrogenase. | acyl-CoA dehydrogenase. | 0.704 |
FabG_31 | KasA_2 | RMCT_1341 | RMCT_0942 | Dehydrogenase. | Fatty acid synthase. | 0.782 |
FabG_31 | Oxc | RMCT_1341 | RMCT_1716 | Dehydrogenase. | Thiamine pyrophosphate binding domain-containing protein; Belongs to the TPP enzyme family. | 0.634 |
FabG_32 | C2-hpah | RMCT_1342 | RMCT_3184 | Short-chain dehydrogenase/reductase SDR. | acyl-CoA dehydrogenase type 2. | 0.511 |
FabG_32 | FabD | RMCT_1342 | RMCT_3817 | Short-chain dehydrogenase/reductase SDR. | Malonyl CoA-acyl carrier protein transacylase fabD. | 0.583 |
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