Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YgaPRhodanese domain-containing protein. (194 aa)    
Predicted Functional Partners:
RMCT_1354
Permease.
 
  
 0.954
BaeB_3
Beta-lactamase domain-containing protein.
 
 
 0.916
CsoR_2
Transposase.
 
   
 0.809
PpsA_2
Beta-ketoacyl synthase.
  
 
 0.703
RMCT_3801
Zn-dependent hydrolase, glyoxylase.
 
 
 0.533
BaeB_2
Zn-dependent hydrolase.
 
 
 0.517
sodB
Superoxide dismutase Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.511
Pks2
Polyketide synthase pks5.
  
 
 0.507
RMCT_3700
Zn-dependent hydrolase.
 
 
 0.504
rplQ
50S ribosomal protein L17.
  
   0.486
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.