STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1354Permease. (293 aa)    
Predicted Functional Partners:
YgaP
Rhodanese domain-containing protein.
 
  
 0.966
BaeB_3
Beta-lactamase domain-containing protein.
 
  
 0.913
CsoR_2
Transposase.
 
   
 0.880
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.504
RMCT_1356
ABC transporter, ATP-binding protein.
       0.491
MoeZ
Molybdopterin biosynthesis-like protein MoeZ.
  
  
 0.466
FccB
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
    0.439
HhoB_2
Trypsin-like serine protease with C-terminal PDZ domain.
   
 
 0.417
RMCT_0109
Membrane-associated serine protease.
   
 
 0.417
DegQ
Trypsin-like serine protease with C-terminal PDZ domain.
   
 
 0.417
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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