STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1409Putative uncharacterized protein. (236 aa)    
Predicted Functional Partners:
RMCT_1410
Putative uncharacterized protein.
 
     0.926
DhlA
Epoxide hydrolase ephC.
  
 0.901
RMCT_1407
Hypothetical protein.
 
 
 
 0.837
RMCT_3194
Virulence factor Mce family protein.
 
    0.791
RMCT_1015
Virulence factor Mce family protein.
 
  
 0.786
RMCT_0584
Conserved Mce associated membrane protein.
 
     0.777
RMCT_3993
Virulence factor Mce family protein.
 
    0.777
RMCT_2776
Putative uncharacterized protein.
 
     0.769
RMCT_3996
Virulence factor Mce family protein.
 
  
 0.762
Mce3C_1
Virulence factor Mce family protein.
 
  
 0.752
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.