Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
RMCT_1412TetR family transcriptional regulator. (204 aa)    
Predicted Functional Partners:
RMCT_1411
3-demethylubiquinone-9 3-methyltransferase.
       0.620
CatD_3
Peroxidase bpoB.
       0.567
RMCT_1415
Family 3 adenylate cyclase.
     
 0.524
RMCT_1414
Ribonuclease BN.
       0.499
RMCT_4242
TetR family transcriptional regulator.
  
     0.489
RMCT_1407
Hypothetical protein.
     
 0.479
RMCT_4014
Adenylate cyclase.
 
     0.479
DhlA
Epoxide hydrolase ephC.
       0.473
RMCT_1409
Putative uncharacterized protein.
       0.472
RMCT_1410
Putative uncharacterized protein.
       0.472
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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