STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_14464Fe-4S ferredoxin. (394 aa)    
Predicted Functional Partners:
XylA
Flavodoxin oxidoreductase.
  
 0.996
HoxY
NADH ubiquinone oxidoreductase, 20 kDa subunit.
 
   
 0.975
HoxH
Nickel-dependent hydrogenase, large subunit.
 
   
 0.975
RMCT_1443
Nitroreductase.
     
 0.756
PqsD
3-oxoacyl-(acyl-carrier-protein) synthase III.
 
     0.678
FabH_2
3-oxoacyl-(acyl-carrier-protein) synthase III.
       0.634
PpsA_6
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
     
 0.576
SdhB
Succinate dehydrogenase iron-sulfur subunit.
   
 
 0.526
FrdB
Fumarate reductase iron-sulfur subunit.
   
 
 0.526
GapA
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.489
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.