STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HoxYNADH ubiquinone oxidoreductase, 20 kDa subunit. (252 aa)    
Predicted Functional Partners:
HoxH
Nickel-dependent hydrogenase, large subunit.
 
 0.999
RMCT_1446
4Fe-4S ferredoxin.
 
   
 0.975
XylA
Flavodoxin oxidoreductase.
 
   
 0.975
FccB
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
    
 0.911
CysK
Lyase.
     
  0.900
Sir
Ferredoxin-dependent nitrite reductase nirA; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
  0.900
CysK1
Cysteine synthase A cysK1; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
  0.900
metB
Cystathionine gamma-synthase.
     
  0.900
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
     
  0.900
RMCT_0722
Hydrogen:quinone oxidoreductase.
  
 
 0.872
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.