Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HoxYNADH ubiquinone oxidoreductase, 20 kDa subunit. (252 aa)    
Predicted Functional Partners:
HoxH
Nickel-dependent hydrogenase, large subunit.
 
 
 0.996
XylA
Flavodoxin oxidoreductase.
 
 
 
 0.981
RMCT_1446
4Fe-4S ferredoxin.
 
   
 0.971
NuoE
NADH dehydrogenase subunit E.
   
 
 0.826
RMCT_0722
Hydrogen:quinone oxidoreductase.
  
 
 0.811
RMCT_1085
Nickel-dependent hydrogenase large subunit.
  
 
 0.811
NarB
Sulfite reductase (NADPH) subunit alpha.
   
 
 0.783
RMCT_1443
Nitroreductase.
       0.641
FabH_2
3-oxoacyl-(acyl-carrier-protein) synthase III.
       0.618
PqsD
3-oxoacyl-(acyl-carrier-protein) synthase III.
       0.618
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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