Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1454Hypothetical protein. (225 aa)    
Predicted Functional Partners:
RMCT_1455
VTC domain protein.
 
    0.993
RMCT_1453
Spore coat protein CotH.
 
     0.957
RMCT_4445
Conserved membrane protein.
  
  
 0.761
CtpF_2
Metal cation transporter P-type ATPase ctpE.
  
 
 0.625
YloB_1
P-type HAD superfamily ATPase.
  
 
 0.625
YloB_2
P-type HAD superfamily ATPase.
  
 
 0.625
CtpF_1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
 
 0.625
RMCT_1351
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.528
DevR_2
Two component LuxR family transcriptional regulator.
     
 0.502
RMCT_4559
Stage II sporulation protein E.
  
 
 0.498
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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