STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YqfAHemolysin III family channel protein. (246 aa)    
Predicted Functional Partners:
RMCT_1466
Putative uncharacterized protein.
       0.696
RMCT_1467
Short-chain (C15) Z-isoprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
     
 0.688
RecQ_1
ATP-dependent DNA helicase.
   
 0.587
AqpZ2
Glycerol uptake facilitator; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.576
glpK
Glycerol kinase GlpK; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.575
RMCT_2725
Lipoprotein aminopeptidase lpqL.
    
 0.538
FtsH2
ATPase central domain-containing protein; Belongs to the AAA ATPase family.
    
 0.531
EccA1_1
Type VII secretion AAA-ATPase EccA.
    
 0.531
FtsH3
ATPase; Belongs to the AAA ATPase family.
    
 0.531
EccA1_2
ATPase central domain-containing protein.
    
 0.531
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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