STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_1487Cysteine dioxygenase type I. (174 aa)    
Predicted Functional Partners:
RMCT_1486
Rhodanese domain-containing protein.
    0.974
RMCT_1488
RING finger protein unkempt-like protein.
       0.668
ArtM_2
ABC transporter ATP-binding protein.
  
     0.574
LptB_1
ABC transporter ATP-binding protein.
  
     0.571
RMCT_1133
Hypothetical protein.
  
    0.563
FtsE_2
Transmembrane ATP-binding protein ABC transporter.
  
     0.561
RMCT_1818
Protein of unknown function.
  
     0.548
RMCT_1489
Protein LpqV.
       0.529
RMCT_2034
Protein of unknown function.
  
     0.524
RMCT_2033
Hypothetical protein.
  
     0.489
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.