STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YjiAGTPase, G3E family. (342 aa)    
Predicted Functional Partners:
rpsZ
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
 
 0.784
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.624
RMCT_2853
Iron/manganese/zinc ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.608
FimA
Putative uncharacterized protein.
  
  
 0.608
CobN
Cobalamin biosynthesis protein cobN.
 
  
 0.608
CzcD
Cation diffusion facilitator family transporter.
     
 0.572
ArsR
ArsR family transcriptional regulator.
     
 0.563
CobL
Precorrin-6y methyltransferase cobL.
     
 0.563
CymR
BadM/Rrf2 family transcriptional regulator.
     
 0.525
NsrR
BadM/Rrf2 family transcriptional regulator.
     
 0.525
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.