Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RMCT_1504CsbD family protein; Belongs to the UPF0337 (CsbD) family. (58 aa)    
Predicted Functional Partners:
OhrB
Peroxiredoxin, Ohr subfamily.
  
  
 0.593
TagH
O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter rfbE.
  
    0.556
RMCT_4345
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
 
    0.533
RfbD
O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter rfbD.
  
    0.518
NemR
TetR family transcriptional regulator.
     
 0.506
RMCT_2041
Putative uncharacterized protein.
  
  
 0.499
RMCT_3689
Transglycosylase associated protein.
  
  
 0.499
BetC
Hydrolase.
  
  
 0.496
Bfr
Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
  
 0.492
Dps
Ferritin, Dps family protein; Belongs to the Dps family.
  
  
 0.491
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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