Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EfeB | EfeO | RMCT_1524 | RMCT_1523 | Dyp-type peroxidase family protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Periplasmic lipoprotein. | 0.986 |
EfeB | GppA_2 | RMCT_1524 | RMCT_1517 | Dyp-type peroxidase family protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | ppx/GppA family phosphatase. | 0.407 |
EfeB | RMCT_1518 | RMCT_1524 | RMCT_1518 | Dyp-type peroxidase family protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Septum formation initiator subfamily protein. | 0.422 |
EfeB | RMCT_1519 | RMCT_1524 | RMCT_1519 | Dyp-type peroxidase family protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Septum formation initiator. | 0.426 |
EfeB | RMCT_1521 | RMCT_1524 | RMCT_1521 | Dyp-type peroxidase family protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Lipoprotein lpqU. | 0.515 |
EfeB | RMCT_1522 | RMCT_1524 | RMCT_1522 | Dyp-type peroxidase family protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Resolvase domain protein. | 0.572 |
EfeB | eno | RMCT_1524 | RMCT_1520 | Dyp-type peroxidase family protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.432 |
EfeO | EfeB | RMCT_1523 | RMCT_1524 | Periplasmic lipoprotein. | Dyp-type peroxidase family protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.986 |
EfeO | GppA_2 | RMCT_1523 | RMCT_1517 | Periplasmic lipoprotein. | ppx/GppA family phosphatase. | 0.488 |
EfeO | RMCT_1518 | RMCT_1523 | RMCT_1518 | Periplasmic lipoprotein. | Septum formation initiator subfamily protein. | 0.488 |
EfeO | RMCT_1519 | RMCT_1523 | RMCT_1519 | Periplasmic lipoprotein. | Septum formation initiator. | 0.488 |
EfeO | RMCT_1521 | RMCT_1523 | RMCT_1521 | Periplasmic lipoprotein. | Lipoprotein lpqU. | 0.579 |
EfeO | RMCT_1522 | RMCT_1523 | RMCT_1522 | Periplasmic lipoprotein. | Resolvase domain protein. | 0.572 |
EfeO | eno | RMCT_1523 | RMCT_1520 | Periplasmic lipoprotein. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.476 |
GppA_2 | EfeB | RMCT_1517 | RMCT_1524 | ppx/GppA family phosphatase. | Dyp-type peroxidase family protein; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. | 0.407 |
GppA_2 | EfeO | RMCT_1517 | RMCT_1523 | ppx/GppA family phosphatase. | Periplasmic lipoprotein. | 0.488 |
GppA_2 | RMCT_1518 | RMCT_1517 | RMCT_1518 | ppx/GppA family phosphatase. | Septum formation initiator subfamily protein. | 0.992 |
GppA_2 | RMCT_1519 | RMCT_1517 | RMCT_1519 | ppx/GppA family phosphatase. | Septum formation initiator. | 0.927 |
GppA_2 | RMCT_1521 | RMCT_1517 | RMCT_1521 | ppx/GppA family phosphatase. | Lipoprotein lpqU. | 0.775 |
GppA_2 | RMCT_1522 | RMCT_1517 | RMCT_1522 | ppx/GppA family phosphatase. | Resolvase domain protein. | 0.468 |
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