Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DhbF | EryA_1 | RMCT_0774 | RMCT_0775 | Peptide synthetase mbtE. | Acyl transferase domain-containing protein. | 0.994 |
DhbF | EryA_2 | RMCT_0774 | RMCT_0776 | Peptide synthetase mbtE. | Polyketide synthetase mbtC; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.996 |
DhbF | LgrD_1 | RMCT_0774 | RMCT_0773 | Peptide synthetase mbtE. | Peptide synthetase mbtF. | 0.878 |
DhbF | LgrD_2 | RMCT_0774 | RMCT_4555 | Peptide synthetase mbtE. | Linear gramicidin synthetase subunit D. | 0.753 |
DhbF | Pks2 | RMCT_0774 | RMCT_4379 | Peptide synthetase mbtE. | Polyketide synthase pks5. | 0.969 |
DhbF | PpsA_2 | RMCT_0774 | RMCT_0416 | Peptide synthetase mbtE. | Beta-ketoacyl synthase. | 0.987 |
DhbF | PpsA_7 | RMCT_0774 | RMCT_4669 | Peptide synthetase mbtE. | Polyketide synthase pks13. | 0.956 |
DhbF | RMCT_1539 | RMCT_0774 | RMCT_1539 | Peptide synthetase mbtE. | long-chain-fatty-acid--CoA ligase. | 0.872 |
DhbF | RMCT_4593 | RMCT_0774 | RMCT_4593 | Peptide synthetase mbtE. | Linear gramicidin synthetase subunit D. | 0.526 |
DhbF | RMCT_4707 | RMCT_0774 | RMCT_4707 | Peptide synthetase mbtE. | Linear gramicidin synthetase subunit D. | 0.737 |
EryA_1 | DhbF | RMCT_0775 | RMCT_0774 | Acyl transferase domain-containing protein. | Peptide synthetase mbtE. | 0.994 |
EryA_1 | EryA_2 | RMCT_0775 | RMCT_0776 | Acyl transferase domain-containing protein. | Polyketide synthetase mbtC; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.997 |
EryA_1 | LgrD_1 | RMCT_0775 | RMCT_0773 | Acyl transferase domain-containing protein. | Peptide synthetase mbtF. | 0.989 |
EryA_1 | LgrD_2 | RMCT_0775 | RMCT_4555 | Acyl transferase domain-containing protein. | Linear gramicidin synthetase subunit D. | 0.997 |
EryA_1 | Pks2 | RMCT_0775 | RMCT_4379 | Acyl transferase domain-containing protein. | Polyketide synthase pks5. | 0.984 |
EryA_1 | PpsA_2 | RMCT_0775 | RMCT_0416 | Acyl transferase domain-containing protein. | Beta-ketoacyl synthase. | 0.992 |
EryA_1 | PpsA_7 | RMCT_0775 | RMCT_4669 | Acyl transferase domain-containing protein. | Polyketide synthase pks13. | 0.971 |
EryA_1 | RMCT_1539 | RMCT_0775 | RMCT_1539 | Acyl transferase domain-containing protein. | long-chain-fatty-acid--CoA ligase. | 0.804 |
EryA_1 | RMCT_4593 | RMCT_0775 | RMCT_4593 | Acyl transferase domain-containing protein. | Linear gramicidin synthetase subunit D. | 0.987 |
EryA_1 | RMCT_4707 | RMCT_0775 | RMCT_4707 | Acyl transferase domain-containing protein. | Linear gramicidin synthetase subunit D. | 0.997 |
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